Escher
v1.5.1-0
1. Getting started
2. Escher, COBRA, and COBRApy
3. Run Escher locally and in IPython
4. Validate and convert maps
5. Building and contributing maps
6. Developing with Escher
7. EscherConverter
8. JavaScript API
9. Python API
10. License
Escher
Docs
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Index
B
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C
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D
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E
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G
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L
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O
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R
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S
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T
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V
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Z
B
brush_mode() (built-in function)
build_mode() (built-in function)
Builder (class in escher)
C
clear_cache() (in module escher)
D
display_in_browser() (escher.Builder method)
display_in_notebook() (escher.Builder method)
E
escher (module)
escher.Builder() (class)
G
get_cache_dir() (in module escher)
L
list_available_maps() (in module escher)
list_available_models() (in module escher)
list_cached_maps() (in module escher)
list_cached_models() (in module escher)
load_map() (built-in function)
load_model() (built-in function)
O
option.enable_keys (option attribute)
options.allow_building_duplicate_reactions (options attribute)
options.and_method_in_gene_reaction_rule (options attribute)
options.cofactors (options attribute)
options.enable_editing (options attribute)
options.enable_search (options attribute)
options.enable_tooltips (options attribute)
options.fill_screen (options attribute)
options.first_load_callback (options attribute)
options.full_screen_button (options attribute)
options.gene_data (options attribute)
options.gene_font_size (options attribute)
options.hide_all_labels (options attribute)
options.hide_secondary_metabolites (options attribute)
options.highlight_missing (options attribute)
options.identifiers_on_map (options attribute)
options.ignore_bootstrap (options attribute)
options.marker_radius (options attribute)
options.menu (options attribute)
options.metabolite_compare_style (options attribute)
options.metabolite_data (options attribute)
options.metabolite_no_data_color (options attribute)
options.metabolite_no_data_size (options attribute)
options.metabolite_scale (options attribute)
options.metabolite_styles (options attribute)
options.never_ask_before_quit (options attribute)
options.primary_metabolite_radius (options attribute)
options.reaction_compare_style (options attribute)
options.reaction_data (options attribute)
options.reaction_no_data_color (options attribute)
options.reaction_no_data_size (options attribute)
options.reaction_scale (options attribute)
options.reaction_styles (options attribute)
options.scroll_behavior (options attribute)
options.secondary_metabolite_radius (options attribute)
options.show_gene_reaction_rules (options attribute)
options.starting_reaction (options attribute)
options.tooltip_component (options attribute)
options.unique_map_id (options attribute)
options.use_3d_transform (options attribute)
R
rotate_mode() (built-in function)
S
save_html() (escher.Builder method)
set_gene_data() (built-in function)
set_metabolite_data() (built-in function)
set_reaction_data() (built-in function)
T
text_mode() (built-in function)
V
view_mode() (built-in function)
Z
zoom_mode() (built-in function)
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v: v1.5.1-0
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